Virus

Select a virus

: --Please select a virus-- Betacoronavirus Influenza A Phenuiviridae

Surface Protein

Select a protein

: --Please select a protein--

Subgenera/Subtype

Select a subgenera/subtype for the chosen protein

: --Please select a subgenera/subtype--

Epitope Size Percentile

Select the minimum and maximum percentiles of the accessible surface area (ASA) distribution for epitopes and paratopes in antigen-antibody complexes

: (from)     --Select the From of Percentile-- 5 10 20 30 40 50         (to)      --Select the To of Percentile-- 50 60 70 80 90 100

Structural Flexibility Cutoff (RMSD)

Set a maximum average root mean square deviation (RMSD) for residues in a patch. RMSD is computed from hundreds of AF2-predicted models of the given subtype strains for each residue, representing the average RMSD of residues within the patch.

: --Please select a RMSD-- 1.0 2.0 3.0 4.0 5.0 10.0 15.0 20.0 25.0 None

Subunit Overlap Rate

Set a maximum overlap rate for atoms in a patch located at subunit interfaces

: --Please select-- 0.00 0.05 0.10 0.15 0.20 0.25 0.30 0.35 0.40 0.50 0.60 0.70 0.80 0.90 1.00

Residue Glycan Shielding Rate

Set a maximum glycan shielding rate for residues in a patch

: --Please select-- 0.00 0.05 0.10 0.15 0.20 0.25 0.30 0.35 0.40 0.50 0.60 0.70 0.80 0.90 1.00

Overlap Rate between Patches

Set a maximum atom overlap rate between any two patches

: --Please select-- 0.00 0.05 0.10 0.15 0.20 0.25 0.30 0.35 0.40 0.50 0.60 0.70 0.80 0.90 1.00